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arl6 ARF like GTPase 6 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110956246, updated on 13-Oct-2024

Summary

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Gene symbol
arl6
Gene description
ARF like GTPase 6
See related
Ensembl:ENSAPOG00000024515
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See arl6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 2 NC_067114.1 (7909376..7913959, complement)

Chromosome 2 - NC_067114.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein KCTD12-like Neighboring gene solute carrier family 5 member 7a Neighboring gene ephrin type-A receptor 6-like Neighboring gene NOP2/Sun RNA methyltransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067114.1 Chromosome 2 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 6
Names
ADP ribosylation factor like GTPase 6
ADP-ribosylation factor-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067114.1 Reference KAUST_Apoly_ChrSc

    Range
    7909376..7913959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022201592.2 → XP_022057284.1  ADP-ribosylation factor-like protein 6

    UniProtKB/TrEMBL
    A0A3Q1GUU4, A0A3Q1H550
    Related
    ENSAPOP00000034912.1
    Conserved Domains (1) summary
    cd04157
    Location:18 → 179
    Arl6; Arf-like 6 (Arl6) GTPase
Nucleotide Protein
Heading Accession and Version

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