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LOC110956123 ATP-dependent RNA helicase DDX19B [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110956123, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110956123
Gene description
ATP-dependent RNA helicase DDX19B
See related
Ensembl:ENSAPOG00000016313
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
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Genomic context

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See LOC110956123 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (18742213..18749991)

Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene trypsin-like Neighboring gene calcium/calmodulin dependent protein kinase II inhibitor 1 Neighboring gene pseudouridine synthase like 1 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX19B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067117.1 Reference KAUST_Apoly_ChrSc

    Range
    18742213..18749991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022201429.2 → XP_022057121.1  ATP-dependent RNA helicase DDX19B

    UniProtKB/TrEMBL
    A0A3Q1G5E8, A0A3Q1G5F3
    Related
    ENSAPOP00000013510.1
    Conserved Domains (1) summary
    COG0513
    Location:90 → 487
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
Nucleotide Protein
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