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rab7a RAB7a, member RAS oncogene family [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110955289, updated on 15-Mar-2024

Summary

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Gene symbol
rab7a
Gene description
RAB7a, member RAS oncogene family
See related
Ensembl:ENSAPOG00000002585
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See rab7a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 5 NC_067117.1 (22852313..22858482)

Chromosome 5 - NC_067117.1Genomic Context describing neighboring genes Neighboring gene ribophorin I Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific Neighboring gene tubulin monoglycylase TTLL3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067117.1 Chromosome 5 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-7a
Names
ras-related protein rab7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067117.1 Reference KAUST_Apoly_ChrSc

    Range
    22852313..22858482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022200220.2 → XP_022055912.1  ras-related protein Rab-7a

    UniProtKB/TrEMBL
    A0A3Q1EBB1
    Related
    ENSAPOP00000001316.1
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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