U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ddx43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110954148, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ddx43
Gene description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
See related
Ensembl:ENSAPOG00000001712
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ddx43 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 15 NC_067127.1 (2090215..2106508, complement)

Chromosome 15 - NC_067127.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110954157 Neighboring gene solute carrier family 17 member 5 Neighboring gene cyclic GMP-AMP synthase Neighboring gene potassium voltage-gated channel, KQT-like subfamily, member 5a Neighboring gene cannabinoid receptor interacting protein 1b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067127.1 Chromosome 15 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable ATP-dependent RNA helicase DDX43
Names
DEAD-box helicase 43

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067127.1 Reference KAUST_Apoly_ChrSc

    Range
    2090215..2106508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051959844.1 → XP_051815804.1  probable ATP-dependent RNA helicase DDX43

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.