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cmss1 cms1 ribosomal small subunit homolog [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110953356, updated on 15-Mar-2024

Summary

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Gene symbol
cmss1
Gene description
cms1 ribosomal small subunit homolog
See related
Ensembl:ENSAPOG00000010604
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See cmss1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 14 NC_067126.1 (38526862..38557087, complement)

Chromosome 14 - NC_067126.1Genomic Context describing neighboring genes Neighboring gene collagen, type VIII, alpha 1a Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene filamin A-interacting protein 1-like Neighboring gene transmembrane protein 30C Neighboring gene interleukin 1 receptor accessory protein-like 1a Neighboring gene nuclear receptor subfamily 0 group B member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067126.1 Chromosome 14 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CMSS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067126.1 Reference KAUST_Apoly_ChrSc

    Range
    38526862..38557087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022197314.2 → XP_022053006.1  protein CMSS1

    Related
    ENSAPOP00000008468.1
    Conserved Domains (1) summary
    cl21455
    Location:110 → 290
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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