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dhx15 DEAH (Asp-Glu-Ala-His) box helicase 15 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110952590, updated on 15-Mar-2024

Summary

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Gene symbol
dhx15
Gene description
DEAH (Asp-Glu-Ala-His) box helicase 15
See related
Ensembl:ENSAPOG00000018637
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See dhx15 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 23 NC_067135.1 (9571344..9598182)

Chromosome 23 - NC_067135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110972434 Neighboring gene coiled-coil domain containing 149a Neighboring gene peroxisome proliferator-activated receptor gamma, coactivator 1 alpha Neighboring gene glucosidase, beta, acid 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067135.1 Chromosome 23 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067135.1 Reference KAUST_Apoly_ChrSc

    Range
    9571344..9598182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022196198.2 → XP_022051890.1  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1GSZ4
    Conserved Domains (1) summary
    COG1643
    Location:66 → 705
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_022196197.2 → XP_022051889.1  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1FPU2, A0A3Q1GVL5
    Related
    ENSAPOP00000031427.1
    Conserved Domains (1) summary
    COG1643
    Location:86 → 725
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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