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LOC110942925 mitochondrial carnitine/acylcarnitine carrier-like protein [ Helianthus annuus (common sunflower) ]

Gene ID: 110942925, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110942925
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
HanXRQr2_Chr05g0206531
Gene type
protein coding
RefSeq status
MODEL
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Genomic context

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See LOC110942925 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 5 NC_035437.2 (54629850..54637237)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 5 NC_035437.1 (62277220..62280825)

Chromosome 5 - NC_035437.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110940329 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene topless-related protein 4 Neighboring gene 36.4 kDa proline-rich protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein
Names
putative carrier protein
putative mitochondrial carrier domain protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035437.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    54629850..54637237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035989896.1 → XP_035845789.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    Conserved Domains (1) summary
    pfam00153
    Location:4 → 95
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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