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LOC110913835 F-box protein GID2 [ Helianthus annuus (common sunflower) ]

Gene ID: 110913835, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110913835
Gene description
F-box protein GID2
Locus tag
HanXRQr2_Chr02g0054421
Gene type
protein coding
RefSeq status
MODEL
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Genomic context

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See LOC110913835 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 2 NC_035434.2 (33561164..33562235, complement)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 2 NC_035434.1 (39413475..39414572, complement)

Chromosome 2 - NC_035434.2Genomic Context describing neighboring genes Neighboring gene protein MRG2 Neighboring gene small nucleolar RNA R71 Neighboring gene glycine-rich cell wall structural protein 2-like Neighboring gene cytochrome P450 81Q32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2
Names
putative F-box domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035434.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    33561164..33562235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022158654.2 → XP_022014346.1  F-box protein GID2

    UniProtKB/TrEMBL
    A0A251VDQ6
    Conserved Domains (1) summary
    pfam12937
    Location:51 → 88
    F-box-like
Nucleotide Protein
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