U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110884468 sulfoquinovosyl transferase SQD2 [ Helianthus annuus (common sunflower) ]

Gene ID: 110884468, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110884468
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
HanXRQr2_Chr10g0429511
Gene type
protein coding
RefSeq status
MODEL
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Also known as
SQD2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110884468 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 10 NC_035442.2 (40502241..40507243)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 10 NC_035442.1 (51064620..51069538, complement)

Chromosome 10 - NC_035442.2Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein At3g09030 Neighboring gene uncharacterized LOC110881171 Neighboring gene pentatricopeptide repeat-containing protein At1g25360 Neighboring gene laccase-4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sulfoquinovosyl transferase SQD2
Names
putative Glycosyltransferase subfamily 4-like domain-containing protein
putative sulfoquinovosyldiacylglycerol 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035442.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    40502241..40507243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022132177.2 → XP_021987869.1  sulfoquinovosyl transferase SQD2 isoform X1

    UniProtKB/TrEMBL
    A0A251TI10
    Conserved Domains (1) summary
    PLN02871
    Location:46 → 498
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

  2. XM_035978965.1 → XP_035834858.1  sulfoquinovosyl transferase SQD2 isoform X2

    Conserved Domains (1) summary
    PLN02871
    Location:46 → 496
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases