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LOC110852611 glycoprotein 3-alpha-L-fucosyltransferase A [ Folsomia candida ]

Gene ID: 110852611, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110852611
Gene description
glycoprotein 3-alpha-L-fucosyltransferase A
See related
EnsemblRapid:LOC110852611
Gene type
protein coding
RefSeq status
MODEL
Organism
Folsomia candida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia
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Genomic context

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See LOC110852611 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM221717v1 (GCF_002217175.1) Unplaced Scaffold NW_019091199.1 (6406889..6412065, complement)

NW_019091199.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110852613 Neighboring gene alpha-(1,3)-fucosyltransferase 10-like Neighboring gene apoptosis-resistant E3 ubiquitin protein ligase 1 Neighboring gene chromatin-remodeling ATPase INO80

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091199 Unplaced Scaffold Reference ASM221717v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein 3-alpha-L-fucosyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Folsomia candida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM221717v1

Genomic

  1. NW_019091199.1 Reference ASM221717v1

    Range
    6406889..6412065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022100718.2 → XP_021956410.2  glycoprotein 3-alpha-L-fucosyltransferase A isoform X1

    Related
    XP_021956410.2, XM_022100718.2
    Conserved Domains (2) summary
    pfam00852
    Location:290 → 463
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:158 → 267
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_022100719.2 → XP_021956411.2  glycoprotein 3-alpha-L-fucosyltransferase A isoform X2

    Related
    XP_021956411.2, XM_022100719.2
    Conserved Domains (2) summary
    pfam00852
    Location:265 → 438
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:133 → 242
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases