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LOC110850630 chondroitin sulfate synthase 1 [ Folsomia candida ]

Gene ID: 110850630, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110850630
Gene description
chondroitin sulfate synthase 1
Locus tag
Fcan01_02593
See related
EnsemblRapid:LOC110850630
Gene type
protein coding
RefSeq status
MODEL
Organism
Folsomia candida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia
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Genomic context

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See LOC110850630 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM221717v1 (GCF_002217175.1) Unplaced Scaffold NW_019091193.1 (16897261..16901077)

NW_019091193.1Genomic Context describing neighboring genes Neighboring gene Heterogeneous nuclear ribonucleoprotein at 27C Neighboring gene pre-piRNA 3'-exonuclease trimmer Neighboring gene pro-resilin Neighboring gene uncharacterized LOC110863276 Neighboring gene probable glycerol uptake facilitator protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091193 Unplaced Scaffold Reference ASM221717v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Folsomia candida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM221717v1

Genomic

  1. NW_019091193.1 Reference ASM221717v1

    Range
    16897261..16901077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035846174.1 → XP_035702067.1  chondroitin sulfate synthase 1

    UniProtKB/TrEMBL
    A0A226F3Q8
    Related
    XP_035702067.1, XM_035846174.1
    Conserved Domains (2) summary
    pfam05679
    Location:261 → 826
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:103 → 289
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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