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PIG-V phosphatidylinositol glycan anchor biosynthesis class V [ Folsomia candida ]

Gene ID: 110847633, updated on 6-Jul-2024

Summary

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Gene symbol
PIG-V
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Locus tag
Fcan01_07770
See related
EnsemblRapid:LOC110847633
Gene type
protein coding
RefSeq status
MODEL
Organism
Folsomia candida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia
Orthologs
fruit fly all
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Genomic context

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See PIG-V in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM221717v1 (GCF_002217175.1) Unplaced Scaffold NW_019091195.1 (8661336..8663802)

NW_019091195.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein 2 Neighboring gene ATP-dependent helicase brm Neighboring gene ATP-dependent RNA helicase DDX42 Neighboring gene uncharacterized LOC118434920 Neighboring gene vascular endothelial growth factor receptor 1 Neighboring gene lysosomal acid phosphatase Neighboring gene uncharacterized LOC110847593

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091195 Unplaced Scaffold Reference ASM221717v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Folsomia candida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM221717v1

Genomic

  1. NW_019091195.1 Reference ASM221717v1

    Range
    8661336..8663802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022094612.2 → XP_021950304.1  GPI mannosyltransferase 2 isoform X1

    Related
    XP_021950304.1, XM_022094612.2
    Conserved Domains (1) summary
    cl21590
    Location:160 → 601
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_022094613.2 → XP_021950305.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A226EMP9
    Related
    XP_021950305.1, XM_022094613.2
    Conserved Domains (1) summary
    cl21590
    Location:160 → 576
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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