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Tmtc4 Transmembrane O-mannosyltransferase targeting cadherins 4 [ Folsomia candida ]

Gene ID: 110845948, updated on 3-Jul-2024

Summary

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Gene symbol
Tmtc4
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 4
Locus tag
Fcan01_08290
See related
EnsemblRapid:LOC110845948
Gene type
protein coding
RefSeq status
MODEL
Organism
Folsomia candida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia
Orthologs
fruit fly all
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Genomic context

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See Tmtc4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM221717v1 (GCF_002217175.1) Unplaced Scaffold NW_019091195.1 (13040060..13044038)

NW_019091195.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110846566 Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene cuticle protein 16.5 Neighboring gene MICAL-like protein 1 Neighboring gene glycine-rich cell wall structural protein 2 Neighboring gene uncharacterized LOC110845755

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091195 Unplaced Scaffold Reference ASM221717v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4
Names
Transmembrane and TPR repeat-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Folsomia candida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM221717v1

Genomic

  1. NW_019091195.1 Reference ASM221717v1

    Range
    13040060..13044038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022092506.2 → XP_021948198.1  protein O-mannosyl-transferase TMTC4

    UniProtKB/TrEMBL
    A0A226EPA0
    Related
    XP_021948198.1, XM_022092506.2
    Conserved Domains (3) summary
    COG0457
    Location:445 → 676
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:429 → 457
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:254 → 325
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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