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LOC110844767 N-acetylgalactosaminyltransferase 7 [ Folsomia candida ]

Gene ID: 110844767, updated on 1-Jul-2024

Summary

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Gene symbol
LOC110844767
Gene description
N-acetylgalactosaminyltransferase 7
Locus tag
Fcan01_05531
See related
EnsemblRapid:LOC110844767
Gene type
protein coding
RefSeq status
MODEL
Organism
Folsomia candida
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia
Orthologs
fruit fly all
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Genomic context

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See LOC110844767 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM221717v1 (GCF_002217175.1) Unplaced Scaffold NW_019091194.1 (10297562..10303132)

NW_019091194.1Genomic Context describing neighboring genes Neighboring gene zinc transporter 6 Neighboring gene serine/threonine-protein kinase BUR1 Neighboring gene FCF1 rRNA-processing protein Bka Neighboring gene INO80 complex subunit B-like Neighboring gene intraflagellar transport 43 Neighboring gene DNA damage-binding protein pic Neighboring gene uncharacterized LOC110844036

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091194 Unplaced Scaffold Reference ASM221717v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Folsomia candida Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM221717v1

Genomic

  1. NW_019091194.1 Reference ASM221717v1

    Range
    10297562..10303132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035847943.1 → XP_035703836.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A226EVA0
    Related
    XP_035703836.1, XM_035847943.1
    Conserved Domains (2) summary
    cd02510
    Location:141 → 448
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:464 → 585
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_035847944.1 → XP_035703837.1  N-acetylgalactosaminyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A226EVA0
    Related
    XP_035703837.1, XM_035847944.1
    Conserved Domains (2) summary
    cd02510
    Location:141 → 440
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:456 → 577
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_035847942.1 → XP_035703835.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A226EVA0
    Related
    XP_035703835.1, XM_035847942.1
    Conserved Domains (2) summary
    cd02510
    Location:141 → 448
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:464 → 585
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_022091050.2 → XP_021946742.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A226EVA0
    Related
    XP_021946742.1, XM_022091050.2
    Conserved Domains (2) summary
    cd02510
    Location:141 → 448
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:464 → 578
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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