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LOC110839939 carotenoid isomerooxygenase-like [ Zootermopsis nevadensis ]

Gene ID: 110839939, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110839939
Gene description
carotenoid isomerooxygenase-like
Locus tag
L798_02434
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
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Genomic context

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See LOC110839939 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019060890.1 (323351..348655, complement)

NW_019060890.1Genomic Context describing neighboring genes Neighboring gene short-chain specific acyl-CoA dehydrogenase, mitochondrial-like Neighboring gene uncharacterized LOC110839942 Neighboring gene endothelin-converting enzyme 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019060890 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019060890.1 Reference ZooNev1.0 Primary Assembly

    Range
    323351..348655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022084567.1 → XP_021940259.1  carotenoid isomerooxygenase-like isoform X2

    UniProtKB/TrEMBL
    A0A067QUF9
    Conserved Domains (1) summary
    cl10080
    Location:23 → 378
    RPE65; Retinal pigment epithelial membrane protein

  2. XM_022084566.1 → XP_021940258.1  carotenoid isomerooxygenase-like isoform X1

    UniProtKB/TrEMBL
    A0A067QUF9
    Conserved Domains (1) summary
    pfam03055
    Location:23 → 434
    RPE65; Retinal pigment epithelial membrane protein

RNA

  1. XR_002546696.1 RNA Sequence

  2. XR_002546698.1 RNA Sequence

  3. XR_002546697.1 RNA Sequence

  4. XR_002546695.1 RNA Sequence

  5. XR_002546699.1 RNA Sequence

  6. XR_002546700.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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