U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C1GalTA Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Zootermopsis nevadensis ]

Gene ID: 110837984, updated on 14-Nov-2024

Summary

Go to the top of the page Help
Gene symbol
C1GalTA
Gene description
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Locus tag
L798_15430
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C1GalTA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019060471.1 (95855..114541, complement)

NW_019060471.1Genomic Context describing neighboring genes Neighboring gene ras-related protein M-Ras-like Neighboring gene ATP-dependent DNA helicase hay Neighboring gene serine/threonine-protein kinase tousled-like 2 Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene late secretory pathway protein AVL9 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019060471 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in core 1 O-glycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019060471.1 Reference ZooNev1.0 Primary Assembly

    Range
    95855..114541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022080720.1 → XP_021936412.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cl21608
    Location:108 → 270
    Galactosyl_T; Galactosyltransferase

  2. XM_022080719.1 → XP_021936411.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A067QWL0
    Conserved Domains (1) summary
    cl21608
    Location:115 → 277
    Galactosyl_T; Galactosyltransferase

  3. XM_022080718.1 → XP_021936410.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:121 → 283
    Galactosyl_T; Galactosyltransferase

  4. XM_022080717.1 → XP_021936409.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:140 → 302
    Galactosyl_T; Galactosyltransferase

  5. XM_022080723.1 → XP_021936415.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X6

    Conserved Domains (1) summary
    cl21608
    Location:73 → 235
    Galactosyl_T; Galactosyltransferase

  6. XM_022080722.1 → XP_021936414.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X5

    Conserved Domains (1) summary
    cl21608
    Location:105 → 267
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases