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LOC110823743 mediator of RNA polymerase II transcription subunit 23 [ Carica papaya (papaya) ]

Gene ID: 110823743, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110823743
Gene description
mediator of RNA polymerase II transcription subunit 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Carica papaya
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Papaya1.0 (GCF_000150535.2) Unplaced Scaffold NW_019014690.1 (2971394..3004314, complement)

NW_019014690.1Genomic Context describing neighboring genes Neighboring gene probable peroxygenase 4 Neighboring gene protein TIFY 6B-like Neighboring gene glucan endo-1,3-beta-glucosidase 3 Neighboring gene F-box protein SKIP28 Neighboring gene dynein light chain 1, cytoplasmic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019014690 Unplaced Scaffold Reference Papaya1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carica papaya Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Papaya1.0 Primary Assembly

Genomic

  1. NW_019014690.1 Reference Papaya1.0 Primary Assembly

    Range
    2971394..3004314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022054207.1 → XP_021909899.1  mediator of RNA polymerase II transcription subunit 23

    Conserved Domains (1) summary
    pfam08601
    Location:146 → 229
    PAP1; Transcription factor PAP1
Nucleotide Protein
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