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LOC110820184 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 [ Carica papaya (papaya) ]

Gene ID: 110820184, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110820184
Gene description
probable tRNA (guanine(26)-N(2))-dimethyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Carica papaya
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Genomic context

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See LOC110820184 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Papaya1.0 (GCF_000150535.2) Unplaced Scaffold NW_019014678.1 (2309746..2316510, complement)

NW_019014678.1Genomic Context describing neighboring genes Neighboring gene UDP-arabinopyranose mutase 1 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene purine permease 3-like Neighboring gene purine permease 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019014678 Unplaced Scaffold Reference Papaya1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tRNA (guanine(26)-N(2))-dimethyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carica papaya Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Papaya1.0 Primary Assembly

Genomic

  1. NW_019014678.1 Reference Papaya1.0 Primary Assembly

    Range
    2309746..2316510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022049613.1 → XP_021905305.1  probable tRNA (guanine(26)-N(2))-dimethyltransferase 2

    Conserved Domains (1) summary
    cl17173
    Location:71 → 533
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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