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LOC110817515 methyltransferase-like protein 23 [ Carica papaya (papaya) ]

Gene ID: 110817515, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110817515
Gene description
methyltransferase-like protein 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Carica papaya
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Genomic context

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See LOC110817515 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Papaya1.0 (GCF_000150535.2) Unplaced Scaffold NW_019014663.1 (427069..428789)

NW_019014663.1Genomic Context describing neighboring genes Neighboring gene probable sugar phosphate/phosphate translocator At1g12500 Neighboring gene probable polygalacturonase Neighboring gene heat shock protein 83-like Neighboring gene guard cell S-type anion channel SLAC1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019014663 Unplaced Scaffold Reference Papaya1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carica papaya Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Papaya1.0 Primary Assembly

Genomic

  1. NW_019014663.1 Reference Papaya1.0 Primary Assembly

    Range
    427069..428789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022046098.1 → XP_021901790.1  methyltransferase-like protein 23 isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:26 → 147
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_022046097.1 → XP_021901789.1  methyltransferase-like protein 23 isoform X2

    Conserved Domains (1) summary
    cl17173
    Location:6 → 140
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_022046096.1 → XP_021901788.1  methyltransferase-like protein 23 isoform X1

    Conserved Domains (1) summary
    cl17173
    Location:26 → 176
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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