U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110761982 F-box protein GID2 [ Prunus avium (sweet cherry) ]

Gene ID: 110761982, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110761982
Gene description
F-box protein GID2
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus avium
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110761982 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current PAV_r1.0 (GCF_002207925.1) Unplaced Scaffold NW_018921930.1 (150832..151854)

NW_018921930.1Genomic Context describing neighboring genes Neighboring gene MFP1 attachment factor 1-like Neighboring gene uncharacterized LOC110762003 Neighboring gene protein MRG2-like Neighboring gene putative receptor protein kinase ZmPK1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018921930 Unplaced Scaffold Reference PAV_r1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus avium Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAV_r1.0

Genomic

  1. NW_018921930.1 Reference PAV_r1.0

    Range
    150832..151854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021964571.1 → XP_021820263.1  F-box protein GID2

    UniProtKB/TrEMBL
    A0A6P5T1S6
    Conserved Domains (1) summary
    pfam00646
    Location:46 → 91
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases