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LOC110710406 F-box/FBD/LRR-repeat protein At5g22660-like [ Chenopodium quinoa (quinoa) ]

Gene ID: 110710406, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110710406
Gene description
F-box/FBD/LRR-repeat protein At5g22660-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Genomic context

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See LOC110710406 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018745170.1 (2167613..2170408)

NW_018745170.1Genomic Context describing neighboring genes Neighboring gene F-box/FBD/LRR-repeat protein At2g26030-like Neighboring gene uncharacterized LOC110710164 Neighboring gene polyvinylalcohol dehydrogenase-like Neighboring gene sulfoquinovosyl transferase SQD2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018745170 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/FBD/LRR-repeat protein At5g22660-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018745170.1 Reference ASM168347v1 Primary Assembly

    Range
    2167613..2170408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021888699.1 → XP_021744391.1  F-box/FBD/LRR-repeat protein At5g22660-like

    UniProtKB/TrEMBL
    A0A803LYY6
    Conserved Domains (3) summary
    sd00032
    Location:155 → 178
    LRR_2; leucine-rich repeat [structural motif]
    pfam00646
    Location:29 → 66
    F-box; F-box domain
    pfam08387
    Location:393 → 435
    FBD
Nucleotide Protein
Heading Accession and Version

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