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LOC110709001 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [ Chenopodium quinoa (quinoa) ]

Gene ID: 110709001, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110709001
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Genomic context

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See LOC110709001 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018745024.1 (10489872..10492265)

NW_018745024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110708613 Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 Neighboring gene probable microtubule-binding protein TANGLED Neighboring gene kinesin-like protein KIN-14S

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018745024 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018745024.1 Reference ASM168347v1 Primary Assembly

    Range
    10489872..10492265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021887227.1 → XP_021742919.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

    UniProtKB/TrEMBL
    A0A803KP75
    Conserved Domains (1) summary
    cd02537
    Location:301 → 538
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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