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LOC110706306 beta-glucosidase-like SFR2, chloroplastic [ Chenopodium quinoa (quinoa) ]

Gene ID: 110706306, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110706306
Gene description
beta-glucosidase-like SFR2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Genomic context

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See LOC110706306 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018744955.1 (45864..56022, complement)

NW_018744955.1Genomic Context describing neighboring genes Neighboring gene F-box protein At5g49610-like Neighboring gene serine carboxypeptidase-like 33 Neighboring gene uncharacterized LOC110706308 Neighboring gene uncharacterized LOC110706309

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018744955 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase-like SFR2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018744955.1 Reference ASM168347v1 Primary Assembly

    Range
    45864..56022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021884202.1 → XP_021739894.1  beta-glucosidase-like SFR2, chloroplastic

    UniProtKB/TrEMBL
    A0A803MNC3
    Conserved Domains (1) summary
    COG2723
    Location:192 → 543
    BglB; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]

  2. XM_021884201.1 → XP_021739893.1  beta-glucosidase-like SFR2, chloroplastic

    UniProtKB/TrEMBL
    A0A803MNC3
    Conserved Domains (1) summary
    COG2723
    Location:192 → 543
    BglB; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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