U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110697975 GPI mannosyltransferase 1-like [ Chenopodium quinoa (quinoa) ]

Gene ID: 110697975, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110697975
Gene description
GPI mannosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110697975 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018744502.1 (1992341..1998639, complement)

NW_018744502.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110698168 Neighboring gene uncharacterized LOC110697974 Neighboring gene uncharacterized LOC110698169 Neighboring gene serine/threonine-protein phosphatase 7 long form homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018744502 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018744502.1 Reference ASM168347v1 Primary Assembly

    Range
    1992341..1998639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021875371.1 → XP_021731063.1  GPI mannosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A803MAU3, A0A803MBB7
    Conserved Domains (1) summary
    PLN02841
    Location:3 → 421
    PLN02841; GPI mannosyltransferase

  2. XM_021875370.1 → XP_021731062.1  GPI mannosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A803MAU3, A0A803MBB7
    Conserved Domains (1) summary
    PLN02841
    Location:3 → 421
    PLN02841; GPI mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases