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LOC110689203 uncharacterized protein C18orf8-like [ Chenopodium quinoa (quinoa) ]

Gene ID: 110689203, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110689203
Gene description
uncharacterized protein C18orf8-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Genomic context

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See LOC110689203 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018743955.1 (3864069..3887262)

NW_018743955.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein DDB_G0286901 Neighboring gene uncharacterized LOC110689552 Neighboring gene kinesin-like protein KIN-7K, chloroplastic Neighboring gene uncharacterized LOC110689458

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018743955 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mon1-Ccz1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C18orf8-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018743955.1 Reference ASM168347v1 Primary Assembly

    Range
    3864069..3887262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021865928.1 → XP_021721620.1  uncharacterized protein C18orf8-like

    UniProtKB/TrEMBL
    A0A803LM15
    Conserved Domains (1) summary
    pfam07035
    Location:577 → 725
    Mic1; Colon cancer-associated protein Mic1-like

  2. XM_021865931.1 → XP_021721623.1  uncharacterized protein C18orf8-like

    UniProtKB/TrEMBL
    A0A803LM15
    Conserved Domains (1) summary
    pfam07035
    Location:577 → 725
    Mic1; Colon cancer-associated protein Mic1-like

  3. XM_021865929.1 → XP_021721621.1  uncharacterized protein C18orf8-like

    UniProtKB/TrEMBL
    A0A803LM15
    Conserved Domains (1) summary
    pfam07035
    Location:577 → 725
    Mic1; Colon cancer-associated protein Mic1-like

  4. XM_021865930.1 → XP_021721622.1  uncharacterized protein C18orf8-like

    UniProtKB/TrEMBL
    A0A803LM15
    Conserved Domains (1) summary
    pfam07035
    Location:577 → 725
    Mic1; Colon cancer-associated protein Mic1-like
Nucleotide Protein
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