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LOC110645634 hydroxyproline O-arabinosyltransferase RDN2 [ Hevea brasiliensis (rubber tree) ]

Gene ID: 110645634, updated on 2-Nov-2023

Summary

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Gene symbol
LOC110645634
Gene description
hydroxyproline O-arabinosyltransferase RDN2
Locus tag
P3X46_001745
Gene type
protein coding
RefSeq status
MODEL
Organism
Hevea brasiliensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Genomic context

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See LOC110645634 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 1 NC_079493.1 (126119681..126124432, complement)
100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746972.1 (3206..8084)

Chromosome 1 - NC_079493.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110645636 Neighboring gene aspartyl protease AED3 Neighboring gene NADPH:quinone oxidoreductase-like Neighboring gene NADPH:quinone oxidoreductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase RDN2
Names
hydroxyproline O-arabinosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3005281v1 Primary Assembly

Genomic

  1. NC_079493.1 Reference ASM3005281v1 Primary Assembly

    Range
    126119681..126124432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021798856.2 → XP_021654548.2  hydroxyproline O-arabinosyltransferase RDN2

  2. XM_058152044.1 → XP_058008027.1  hydroxyproline O-arabinosyltransferase RDN2

Nucleotide Protein
Heading Accession and Version

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