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LOC110641775 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A [ Hevea brasiliensis (rubber tree) ]

Gene ID: 110641775, updated on 2-Nov-2023

Summary

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Gene symbol
LOC110641775
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Locus tag
P3X46_007712
Gene type
protein coding
RefSeq status
MODEL
Organism
Hevea brasiliensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Genomic context

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See LOC110641775 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 4 NC_079496.1 (113495234..113504562)
100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746704.1 (66865..83296)

Chromosome 4 - NC_079496.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g77170, mitochondrial Neighboring gene SNW/SKI-interacting protein Neighboring gene ethylene-responsive transcription factor TINY Neighboring gene uncharacterized LOC110638966 Neighboring gene uncharacterized LOC110638978

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3005281v1 Primary Assembly

Genomic

  1. NC_079496.1 Reference ASM3005281v1 Primary Assembly

    Range
    113495234..113504562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021793616.2 → XP_021649308.2  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1

  2. XM_021793617.2 → XP_021649309.2  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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