U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110638562 hydroxyproline O-galactosyltransferase HPGT1 [ Hevea brasiliensis (rubber tree) ]

Gene ID: 110638562, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110638562
Gene description
hydroxyproline O-galactosyltransferase HPGT1
Locus tag
P3X46_016799
Gene type
protein coding
RefSeq status
MODEL
Organism
Hevea brasiliensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110638562 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 9 NC_079501.1 (33771570..33776483)
100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746529.1 (20365..25713)

Chromosome 9 - NC_079501.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110656988 Neighboring gene 50S ribosomal protein L18, chloroplastic-like Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene probable inactive receptor kinase At4g23740

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hydroxyproline O-galactosyltransferase HPGT1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3005281v1 Primary Assembly

Genomic

  1. NC_079501.1 Reference ASM3005281v1 Primary Assembly

    Range
    33771570..33776483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058153711.1 → XP_058009694.1  hydroxyproline O-galactosyltransferase HPGT1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases