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LOC110635648 uncharacterized LOC110635648 [ Hevea brasiliensis (rubber tree) ]

Gene ID: 110635648, updated on 2-Nov-2023

Summary

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Gene symbol
LOC110635648
Gene description
uncharacterized LOC110635648
Locus tag
P3X46_022789
Gene type
protein coding
RefSeq status
MODEL
Organism
Hevea brasiliensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Genomic context

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See LOC110635648 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 13 NC_079505.1 (68859853..68863990)
100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746414.1 (557446..561814)

Chromosome 13 - NC_079505.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131172185 Neighboring gene auxin-responsive protein IAA31 Neighboring gene topless-related protein 4 Neighboring gene uncharacterized LOC110661227

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC110635648

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3005281v1 Primary Assembly

Genomic

  1. NC_079505.1 Reference ASM3005281v1 Primary Assembly

    Range
    68859853..68863990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021785070.2 → XP_021640762.2  uncharacterized protein LOC110635648

  2. XM_058132145.1 → XP_057988128.1  uncharacterized protein LOC110635648

  3. XM_021785067.2 → XP_021640759.2  uncharacterized protein LOC110635648

  4. XM_021785069.2 → XP_021640761.2  uncharacterized protein LOC110635648

Nucleotide Protein
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