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LOC110632865 mitochondrial arginine transporter BAC1 [ Hevea brasiliensis (rubber tree) ]

Gene ID: 110632865, updated on 2-Nov-2023

Summary

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Gene symbol
LOC110632865
Gene description
mitochondrial arginine transporter BAC1
Locus tag
P3X46_020298
Gene type
protein coding
RefSeq status
MODEL
Organism
Hevea brasiliensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Genomic context

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See LOC110632865 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 11 NC_079503.1 (83427063..83431161)
100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746309.1 (464341..468493, complement)

Chromosome 11 - NC_079503.1Genomic Context describing neighboring genes Neighboring gene putative E3 ubiquitin-protein ligase RING1a Neighboring gene glyoxysomal processing protease, glyoxysomal-like Neighboring gene squamosa promoter-binding-like protein 3 Neighboring gene uncharacterized LOC110632867 Neighboring gene dof zinc finger protein DOF1.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3005281v1 Primary Assembly

Genomic

  1. NC_079503.1 Reference ASM3005281v1 Primary Assembly

    Range
    83427063..83431161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021781228.2 → XP_021636920.2  mitochondrial arginine transporter BAC1 isoform X1

  2. XM_021781229.2 → XP_021636921.2  mitochondrial arginine transporter BAC1 isoform X2

RNA

  1. XR_009141421.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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