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LOC110627687 probable beta-1,3-galactosyltransferase 2 [ Manihot esculenta (cassava) ]

Gene ID: 110627687, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110627687
Gene description
probable beta-1,3-galactosyltransferase 2
Locus tag
MANES_12G074300v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110627687 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 12 NC_035172.2 (8183599..8187721, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG12 NC_035172.1 (7598514..7602612, complement)

Chromosome 12 - NC_035172.2Genomic Context describing neighboring genes Neighboring gene membrane metalloprotease ARASP, chloroplastic Neighboring gene (+)-pulegone reductase Neighboring gene protein RRP6-like 3 Neighboring gene NEDD8-activating enzyme E1 regulatory subunit AXR1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035172.2 Reference M.esculenta_v8 Primary Assembly

    Range
    8183599..8187721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021774034.2 → XP_021629726.1  probable beta-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2C9UUI5
    Conserved Domains (1) summary
    PLN03193
    Location:1 → 405
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_021774033.2 → XP_021629725.1  probable beta-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2C9UU58
    Conserved Domains (1) summary
    PLN03193
    Location:1 → 408
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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