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LOC110627412 cellulose synthase A catalytic subunit 4 [UDP-forming] [ Manihot esculenta (cassava) ]

Gene ID: 110627412, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110627412
Gene description
cellulose synthase A catalytic subunit 4 [UDP-forming]
Locus tag
MANES_12G035500v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 12 NC_035172.2 (3133355..3137985, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG12 NC_035172.1 (2825281..2829425, complement)

Chromosome 12 - NC_035172.2Genomic Context describing neighboring genes Neighboring gene exocyst complex component EXO84A Neighboring gene BRCA1-associated RING domain protein 1 Neighboring gene protein PHOSPHATE STARVATION RESPONSE 1 Neighboring gene acid phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 4 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035172.2 Reference M.esculenta_v8 Primary Assembly

    Range
    3133355..3137985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043949045.1 → XP_043804980.1  cellulose synthase A catalytic subunit 4 [UDP-forming] isoform X2

    UniProtKB/TrEMBL
    A0A2C9UTF1
    Conserved Domains (1) summary
    PLN02915
    Location:13 → 1046
    PLN02915; cellulose synthase A [UDP-forming], catalytic subunit

  2. XM_043949044.1 → XP_043804979.1  cellulose synthase A catalytic subunit 4 [UDP-forming] isoform X1

    UniProtKB/TrEMBL
    A0A2C9UTF1
    Conserved Domains (1) summary
    PLN02915
    Location:13 → 1047
    PLN02915; cellulose synthase A [UDP-forming], catalytic subunit
Nucleotide Protein
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