U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110625547 beta-1,3-galactosyltransferase GALT1 [ Manihot esculenta (cassava) ]

Gene ID: 110625547, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110625547
Gene description
beta-1,3-galactosyltransferase GALT1
Locus tag
MANES_01G036300v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110625547 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 1 NC_035161.2 (6820515..6827067, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG1 NC_035161.1 (6149180..6155745, complement)

Chromosome 1 - NC_035161.2Genomic Context describing neighboring genes Neighboring gene (R)-mandelonitrile lyase-like Neighboring gene E3 ubiquitin-protein ligase MPSR1 Neighboring gene pentatricopeptide repeat-containing protein At2g02980, chloroplastic Neighboring gene 4-hydroxybenzoate polyprenyltransferase, mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-galactosyltransferase GALT1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035161.2 Reference M.esculenta_v8 Primary Assembly

    Range
    6820515..6827067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021771192.2 → XP_021626884.1  beta-1,3-galactosyltransferase GALT1

    UniProtKB/TrEMBL
    A0A2C9WIU3
    Conserved Domains (1) summary
    PLN03133
    Location:1 → 630
    PLN03133; beta-1,3-galactosyltransferase; Provisional

  2. XM_021771178.2 → XP_021626870.1  beta-1,3-galactosyltransferase GALT1

    UniProtKB/TrEMBL
    A0A2C9WIU3
    Conserved Domains (1) summary
    PLN03133
    Location:1 → 630
    PLN03133; beta-1,3-galactosyltransferase; Provisional

  3. XM_021771187.2 → XP_021626879.1  beta-1,3-galactosyltransferase GALT1

    UniProtKB/TrEMBL
    A0A2C9WIU3
    Conserved Domains (1) summary
    PLN03133
    Location:1 → 630
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases