U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110622900 probable galacturonosyltransferase 7 [ Manihot esculenta (cassava) ]

Gene ID: 110622900, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110622900
Gene description
probable galacturonosyltransferase 7
Locus tag
MANES_09G119300v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110622900 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 9 NC_035169.2 (32208685..32215784)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG9 NC_035169.1 (24232164..24239309)

Chromosome 9 - NC_035169.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110623381 Neighboring gene leucine-rich repeat receptor protein kinase HPCA1 Neighboring gene protein SCARECROW Neighboring gene bifunctional protein FolD 1, mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable galacturonosyltransferase 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035169.2 Reference M.esculenta_v8 Primary Assembly

    Range
    32208685..32215784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043959987.1 → XP_043815922.1  probable galacturonosyltransferase 7 isoform X3

    Conserved Domains (1) summary
    PLN02769
    Location:1 → 621
    PLN02769; Probable galacturonosyltransferase

  2. XM_021767619.2 → XP_021623311.1  probable galacturonosyltransferase 7 isoform X2

    Conserved Domains (1) summary
    PLN02769
    Location:1 → 634
    PLN02769; Probable galacturonosyltransferase

  3. XM_021767617.2 → XP_021623309.1  probable galacturonosyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A2C9VA25
    Conserved Domains (1) summary
    PLN02769
    Location:1 → 636
    PLN02769; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases