U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110617410 UDP-arabinopyranose mutase 3 [ Manihot esculenta (cassava) ]

Gene ID: 110617410, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110617410
Gene description
UDP-arabinopyranose mutase 3
Locus tag
MANES_06G082100v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110617410 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 6 NC_035166.2 (21774511..21777137, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG6 NC_035166.1 (19569895..19572521, complement)

Chromosome 6 - NC_035166.2Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein MADS2 Neighboring gene F-box protein At5g49610 Neighboring gene histone H4 Neighboring gene COBRA-like protein 4 Neighboring gene uncharacterized LOC122723825

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035166.2 Reference M.esculenta_v8 Primary Assembly

    Range
    21774511..21777137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021760161.1 → XP_021615853.1  UDP-arabinopyranose mutase 3

    UniProtKB/TrEMBL
    A0A2C9VNW9
    Conserved Domains (1) summary
    PLN03180
    Location:10 → 350
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases