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LOC110612910 beta-1,6-galactosyltransferase GALT29A [ Manihot esculenta (cassava) ]

Gene ID: 110612910, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110612910
Gene description
beta-1,6-galactosyltransferase GALT29A
Locus tag
MANES_04G004900v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110612910 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 4 NC_035164.2 (682412..686045, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG4 NC_035164.1 (540161..543955, complement)

Chromosome 4 - NC_035164.2Genomic Context describing neighboring genes Neighboring gene CEN-like protein 2 Neighboring gene zinc finger protein WIP3 Neighboring gene protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 Neighboring gene subtilisin-like serine-protease S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,6-galactosyltransferase GALT29A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035164.2 Reference M.esculenta_v8 Primary Assembly

    Range
    682412..686045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021753763.2 → XP_021609455.1  beta-1,6-galactosyltransferase GALT29A isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_043956156.1 → XP_043812091.1  beta-1,6-galactosyltransferase GALT29A isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_021753765.2 → XP_021609457.1  beta-1,6-galactosyltransferase GALT29A isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_043956157.1 → XP_043812092.1  beta-1,6-galactosyltransferase GALT29A isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_021753767.2 → XP_021609459.1  beta-1,6-galactosyltransferase GALT29A isoform X2

    UniProtKB/TrEMBL
    A0A2C9VYC3
    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_021753766.2 → XP_021609458.1  beta-1,6-galactosyltransferase GALT29A isoform X2

    UniProtKB/TrEMBL
    A0A2C9VYC3
    Conserved Domains (1) summary
    pfam00777
    Location:132 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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