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LOC110611765 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [ Manihot esculenta (cassava) ]

Gene ID: 110611765, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110611765
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
Locus tag
MANES_03G079000v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110611765 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 3 NC_035163.2 (21269921..21322861, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG3 NC_035163.1 (11434984..11485819, complement)

Chromosome 3 - NC_035163.2Genomic Context describing neighboring genes Neighboring gene bidirectional sugar transporter SWEET2 Neighboring gene trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 1 Neighboring gene E3 ubiquitin-protein ligase CCNB1IP1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
Names
trehalose-6-phosphate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035163.2 Reference M.esculenta_v8 Primary Assembly

    Range
    21269921..21322861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043954818.1 → XP_043810753.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  2. XM_043954817.1 → XP_043810752.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  3. XM_021752225.2 → XP_021607917.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  4. XM_043954815.1 → XP_043810750.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  5. XM_043954816.1 → XP_043810751.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  6. XM_043954819.1 → XP_043810754.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  7. XM_021752223.2 → XP_021607915.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  8. XM_021752222.2 → XP_021607914.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

  9. XM_021752226.2 → XP_021607918.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A251L838, A0A346TFN3
    Conserved Domains (1) summary
    PLN03064
    Location:1 → 925
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Nucleotide Protein
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