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LOC110611097 callose synthase 3 [ Manihot esculenta (cassava) ]

Gene ID: 110611097, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110611097
Gene description
callose synthase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110611097 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
43
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 3 NC_035163.2 (19811395..19876772, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG3 NC_035163.1 (15353852..15419265, complement)

Chromosome 3 - NC_035163.2Genomic Context describing neighboring genes Neighboring gene probable plastid-lipid-associated protein 12, chloroplastic Neighboring gene uncharacterized LOC110611237 Neighboring gene putative E3 ubiquitin-protein ligase LIN-1 Neighboring gene cellulose synthase-like protein E1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035163.2 Reference M.esculenta_v8 Primary Assembly

    Range
    19811395..19876772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043954802.1 → XP_043810737.1  callose synthase 3 isoform X2

    UniProtKB/TrEMBL
    A0A2C9UEX3

  2. XM_021751222.2 → XP_021606914.1  callose synthase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2C9UEX3
    Conserved Domains (3) summary
    pfam02364
    Location:1059 → 1817
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:56 → 181
    Vta1; Vta1 like
    pfam14288
    Location:327 → 440
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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