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LOC110610584 sucrose synthase [ Manihot esculenta (cassava) ]

Gene ID: 110610584, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110610584
Gene description
sucrose synthase
Locus tag
MANES_03G044400v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Also known as
SuSy1
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Genomic context

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See LOC110610584 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 3 NC_035163.2 (3875109..3880503, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG3 NC_035163.1 (3583295..3589654, complement)

Chromosome 3 - NC_035163.2Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor ERF017 Neighboring gene ethylene-responsive transcription factor ERF017-like Neighboring gene pectinesterase Neighboring gene kinesin-like protein NACK2 Neighboring gene eukaryotic translation initiation factor 3 subunit K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035163.2 Reference M.esculenta_v8 Primary Assembly

    Range
    3875109..3880503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021750566.2 → XP_021606258.1  sucrose synthase

    UniProtKB/TrEMBL
    A0A076NB98, A0A2C9W703
    Conserved Domains (1) summary
    PLN00142
    Location:1 → 806
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version

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