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LOC110603603 hydroxyproline O-arabinosyltransferase 1 [ Manihot esculenta (cassava) ]

Gene ID: 110603603, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110603603
Gene description
hydroxyproline O-arabinosyltransferase 1
Locus tag
MANES_16G125600v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110603603 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 16 NC_035176.2 (32709543..32713372)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG16 NC_035176.1 (27674726..27678528)

Chromosome 16 - NC_035176.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110602897 Neighboring gene ubiquitin-like domain-containing protein CIP73 Neighboring gene flotillin-like protein 4 Neighboring gene pentatricopeptide repeat-containing protein At1g66345, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035176.2 Reference M.esculenta_v8 Primary Assembly

    Range
    32709543..32713372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021741387.2 → XP_021597079.1  hydroxyproline O-arabinosyltransferase 1

    UniProtKB/TrEMBL
    A0A2C9UB32
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases