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LOC110602407 arabinosyltransferase XEG113 [ Manihot esculenta (cassava) ]

Gene ID: 110602407, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110602407
Gene description
arabinosyltransferase XEG113
Locus tag
MANES_15G191800v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110602407 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 15 NC_035175.2 (28523425..28566479, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG15 NC_035175.1 (25507168..25550031, complement)

Chromosome 15 - NC_035175.2Genomic Context describing neighboring genes Neighboring gene F-box protein SKIP31 Neighboring gene glycine-rich protein A3 Neighboring gene uncharacterized LOC122721887 Neighboring gene uncharacterized LOC122721888 Neighboring gene uncharacterized LOC122721980

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arabinosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall pectin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase XEG113

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035175.2 Reference M.esculenta_v8 Primary Assembly

    Range
    28523425..28566479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021739910.2 → XP_021595602.1  arabinosyltransferase XEG113 isoform X1

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  2. XM_043951459.1 → XP_043807394.1  arabinosyltransferase XEG113 isoform X5

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  3. XM_021739913.2 → XP_021595605.1  arabinosyltransferase XEG113 isoform X4

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  4. XM_021739912.2 → XP_021595604.1  arabinosyltransferase XEG113 isoform X3

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  5. XM_021739911.2 → XP_021595603.1  arabinosyltransferase XEG113 isoform X2

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  6. XM_021739909.2 → XP_021595601.1  arabinosyltransferase XEG113 isoform X1

    Conserved Domains (1) summary
    pfam03407
    Location:155 → 381
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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