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LOC110602222 xyloglucan 6-xylosyltransferase 2 [ Manihot esculenta (cassava) ]

Gene ID: 110602222, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110602222
Gene description
xyloglucan 6-xylosyltransferase 2
Locus tag
MANES_15G012300v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110602222 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 15 NC_035175.2 (1085753..1087638, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG15 NC_035175.1 (1080101..1082186, complement)

Chromosome 15 - NC_035175.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122721922 Neighboring gene U2 spliceosomal RNA Neighboring gene translocase of chloroplast 101, chloroplastic Neighboring gene heat shock factor-binding protein Neighboring gene protein RALF-like 33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan 6-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan 6-xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035175.2 Reference M.esculenta_v8 Primary Assembly

    Range
    1085753..1087638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021739684.2 → XP_021595376.1  xyloglucan 6-xylosyltransferase 2

    UniProtKB/TrEMBL
    A0A2C9UC50
    Conserved Domains (1) summary
    PLN03182
    Location:1 → 452
    PLN03182; xyloglucan 6-xylosyltransferase; Provisional
Nucleotide Protein
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