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LOC110601291 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [ Manihot esculenta (cassava) ]

Gene ID: 110601291, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110601291
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
Locus tag
MANES_15G136100v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110601291 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 15 NC_035175.2 (11011489..11015470, complement)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG15 NC_035175.1 (10445782..10449752, complement)

Chromosome 15 - NC_035175.2Genomic Context describing neighboring genes Neighboring gene loganic acid O-methyltransferase Neighboring gene MACPF domain-containing protein At1g14780 Neighboring gene protein KNATM Neighboring gene putative caffeoyl-CoA O-methyltransferase At1g67980

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035175.2 Reference M.esculenta_v8 Primary Assembly

    Range
    11011489..11015470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021738374.2 → XP_021594066.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

    UniProtKB/TrEMBL
    A0A2C9UFV5, A0A2C9UFW5
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 852
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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