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UC.134 long non-coding RNA uc.134 [ Homo sapiens (human) ]

Gene ID: 110599565, updated on 10-Oct-2023

Summary

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Gene symbol
UC.134
Gene description
long non-coding RNA uc.134
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q25.32
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (158526708..158528574)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (161301819..161303685)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (158244497..158246363)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene arginine and serine rich coiled-coil 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20746 Neighboring gene LILRA2 pseudogene 1 Neighboring gene VISTA enhancer hs1413 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:158128478-158129071 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20747 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:158221375-158221874 Neighboring gene ribosomal protein S12 pseudogene 7 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:158260149-158260366 Neighboring gene MLF1 divergent transcript Neighboring gene myeloid leukemia factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel lncRNA uc.134 represses hepatocellular carcinoma progression by inhibiting CUL4A-mediated ubiquitination of LATS1. Ni W, et al. J Hematol Oncol, 2017 Apr 19. PMID 28420424, Free PMC Article
  2. Ultraconserved elements in the human genome. Bejerano G, et al. Science, 2004 May 28. PMID 15131266

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_148407.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC106707

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    158526708..158528574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    161301819..161303685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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