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TMED6 transmembrane p24 trafficking protein 6 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110592337, updated on 15-Mar-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
See related
EnsemblRapid:ENSNSCG00000000837
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 16 NC_058418.1 (42605023..42610999, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734257.1 (17048834..17054805)

Chromosome 16 - NC_058418.1Genomic Context describing neighboring genes Neighboring gene component of oligomeric golgi complex 8 Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene telomeric repeat binding factor 2 Neighboring gene 60S ribosomal protein L13a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058418.1 Reference ASM220157v2

    Range
    42605023..42610999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044922270.1 → XP_044778205.1  transmembrane emp24 domain-containing protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A8M1MXL9

  2. XM_021703283.2 → XP_021558958.1  transmembrane emp24 domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9I4Y3
    Related
    ENSNSCP00000000840.1
    Conserved Domains (1) summary
    pfam01105
    Location:43 → 229
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
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