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ALDH5A1 aldehyde dehydrogenase 5 family member A1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110586674, updated on 15-Mar-2024

Summary

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Gene symbol
ALDH5A1
Gene description
aldehyde dehydrogenase 5 family member A1
See related
EnsemblRapid:ENSNSCG00000004648
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See ALDH5A1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 8 NC_058410.1 (142196058..142221227)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734368.1 (25711220..25736391)

Chromosome 8 - NC_058410.1Genomic Context describing neighboring genes Neighboring gene magnesium transporter MRS2 Neighboring gene glycosylphosphatidylinositol specific phospholipase D1 Neighboring gene KIAA0319 ortholog Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-semialdehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate-semialdehyde dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058410.1 Reference ASM220157v2

    Range
    142196058..142221227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044917370.1 → XP_044773305.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8M1MJM0
    Conserved Domains (1) summary
    TIGR01780
    Location:66 → 523
    SSADH; succinate-semialdehyde dehydrogenase

  2. XM_021696945.1 → XP_021552620.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2Y9HTD4
    Conserved Domains (1) summary
    TIGR01780
    Location:66 → 516
    SSADH; succinate-semialdehyde dehydrogenase

  3. XM_044917371.1 → XP_044773306.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X5

    UniProtKB/TrEMBL
    A0A8M1MHI8
    Conserved Domains (1) summary
    cl11961
    Location:66 → 468
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  4. XM_021696949.1 → XP_021552624.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2Y9HS75
    Conserved Domains (1) summary
    cl11961
    Location:66 → 460
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  5. XM_021696947.1 → XP_021552622.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2Y9HLM1
    Related
    ENSNSCP00000005571.1, ENSNSCT00000006313.1
    Conserved Domains (1) summary
    cl11961
    Location:66 → 455
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  6. XM_021696948.1 → XP_021552623.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2Y9HLM1
    Conserved Domains (1) summary
    cl11961
    Location:66 → 455
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
Nucleotide Protein
Heading Accession and Version

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