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MAN2C1 mannosidase alpha class 2C member 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110583784, updated on 15-Mar-2024

Summary

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Gene symbol
MAN2C1
Gene description
mannosidase alpha class 2C member 1
See related
EnsemblRapid:ENSNSCG00000012314
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See MAN2C1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
26
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 9 NC_058411.1 (112469508..112480959, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734350.1 (2252470..2263921)

Chromosome 9 - NC_058411.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 4 Neighboring gene nei like DNA glycosylase 1 Neighboring gene SIN3 transcription regulator family member A Neighboring gene protein tyrosine phosphatase non-receptor type 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-mannosidase 2C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058411.1 Reference ASM220157v2

    Range
    112469508..112480959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044918464.1 → XP_044774399.1  alpha-mannosidase 2C1 isoform X6

    UniProtKB/TrEMBL
    A0A8M1MUS2
    Conserved Domains (2) summary
    COG0383
    Location:200 → 906
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
    cl15692
    Location:199 → 403
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily

  2. XM_021693745.1 → XP_021549420.1  alpha-mannosidase 2C1 isoform X4

    UniProtKB/TrEMBL
    A0A2Y9HII6
    Conserved Domains (2) summary
    COG0383
    Location:68 → 978
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
    cl25404
    Location:252 → 470
    GH38-57_N_LamB_YdjC_SF; Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins

  3. XM_044918463.1 → XP_044774398.1  alpha-mannosidase 2C1 isoform X5

    UniProtKB/TrEMBL
    A0A8M1MNZ6
    Conserved Domains (2) summary
    cd10813
    Location:252 → 502
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:68 → 982
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]

  4. XM_021693744.1 → XP_021549419.1  alpha-mannosidase 2C1 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9HJ03
    Related
    ENSNSCP00000015249.1, ENSNSCT00000017237.1
    Conserved Domains (2) summary
    cd10813
    Location:252 → 502
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:68 → 1005
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]

  5. XM_021693747.1 → XP_021549422.1  alpha-mannosidase 2C1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9HCQ1
    Related
    ENSNSCP00000015242.1, ENSNSCT00000017229.1
    Conserved Domains (2) summary
    cd10813
    Location:252 → 502
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:68 → 1022
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]

  6. XM_044918462.1 → XP_044774397.1  alpha-mannosidase 2C1 isoform X1

    UniProtKB/TrEMBL
    A0A8M1MKM9
    Conserved Domains (2) summary
    cd10813
    Location:252 → 502
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:68 → 1010
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]

  7. XM_044918465.1 → XP_044774400.1  alpha-mannosidase 2C1 isoform X7

    UniProtKB/TrEMBL
    A0A8M1MMN9
    Conserved Domains (2) summary
    cd10813
    Location:252 → 502
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:68 → 855
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
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