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CLEC5A C-type lectin domain containing 5A [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110582863, updated on 15-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
See related
EnsemblRapid:ENSNSCG00000007992
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 12 NC_058414.1 (93412482..93423342, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734348.1 (12688889..12699661)

Chromosome 12 - NC_058414.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 9A4-like Neighboring gene olfactory receptor 9A4-like Neighboring gene taste 2 receptor member 38 Neighboring gene maltase-glucoamylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058414.1 Reference ASM220157v2

    Range
    93412482..93423342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021692879.1 → XP_021548554.1  C-type lectin domain family 5 member A

    UniProtKB/TrEMBL
    A0A2Y9HGR2
    Related
    ENSNSCP00000009794.1, ENSNSCT00000011135.1
    Conserved Domains (1) summary
    cd03593
    Location:48 → 161
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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