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CLEC12B C-type lectin domain family 12 member B [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110580839, updated on 15-Mar-2024

Summary

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Gene symbol
CLEC12B
Gene description
C-type lectin domain family 12 member B
See related
EnsemblRapid:ENSNSCG00000009592
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See CLEC12B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 5 NC_058407.1 (93998518..94006831)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734332.1 (10077204..10085516, complement)

Chromosome 5 - NC_058407.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 9A Neighboring gene C-type lectin domain family 1 member B Neighboring gene C-type lectin domain family 12 member A Neighboring gene C-type lectin domain family 2 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in natural killer cell inhibitory signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 12 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058407.1 Reference ASM220157v2

    Range
    93998518..94006831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021690490.1 → XP_021546165.1  C-type lectin domain family 12 member B

    UniProtKB/TrEMBL
    A0A2Y9H8K0
    Related
    ENSNSCP00000011762.1, ENSNSCT00000013342.1
    Conserved Domains (1) summary
    cd03593
    Location:143 → 265
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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