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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110573362, updated on 15-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSNSCG00000015363
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 6 NC_058408.1 (2940916..3026084)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734287.1 (2515379..2600221, complement)

Chromosome 6 - NC_058408.1Genomic Context describing neighboring genes Neighboring gene Fc receptor-like protein 1 Neighboring gene CD5 molecule like Neighboring gene small integral membrane protein 42-like Neighboring gene T-cell surface glycoprotein CD1a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058408.1 Reference ASM220157v2

    Range
    2940916..3026084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044916015.1 → XP_044771950.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A8M1MFT4
    Conserved Domains (5) summary
    smart00408
    Location:321 → 373
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:230 → 304
    IG; Immunoglobulin
    smart00410
    Location:27 → 116
    IG_like; Immunoglobulin like
    cd00096
    Location:409 → 413
    Ig; Ig strand B [structural motif]
    cl11960
    Location:391 → 488
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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